BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D05SP1|AL427475
(574 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 797 0.0
>3x_Contig1757
Length = 24754
Score = 797 bits (395), Expect = 0.0
Identities = 401/405 (99%)
Strand = Plus / Plus
Query: 2 tcgattgatgaagccatttctattttcaacaatataaaggcaacgaaaatagggcttcca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21145 tcgattgatgaagccatttctattttcaacaatataaaggcaacgaaaatagggcttcca 21204
Query: 62 gcaagatcacctgtaatgaatgcccaaccgtatggaatgcagccacataacgtcatgccg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21205 gcaagatcacctgtaatgaatgcccaaccgtatggaatgcagccacataacgtcatgccg 21264
Query: 122 cagcaaccatacggatacatgcctccgcaacaacaatacccaggtaacatgcctatgatg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21265 cagcaaccatacggatacatgcctccgcaacaacaatacccaggtaacatgcctatgatg 21324
Query: 182 cctcaacaacaaatgtatggtaacatgccacccacccaaaactatggaatgccaccacca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21325 cctcaacaacaaatgtatggtaacatgccacccacccaaaactatggaatgccaccacca 21384
Query: 242 ccacccccacaacagggccacggttaccagggatatccgcaacatccacagatgatgcca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21385 ccacccccacaacagggccacggttaccagggatatccgcaacatccacagatgatgcca 21444
Query: 302 caacaaggcggacttgatcaaaaccaattgttggctgcgttacaaaatcttccamcaaac 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 21445 caacaaggcggacttgatcaaaaccaattgttggctgcgttacaaaatcttccaccaaac 21504
Query: 362 gttgtctwgaatctactgcaactagcccaacaaacaaatcaamaa 406
||||||| ||||||||||||||||||||||||| |||||||| ||
Sbjct: 21505 gttgtcttgaatctactgcaactagcccaacaaccaaatcaacaa 21549
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3769
Number of Sequences: 1807
Number of extensions: 3769
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 574
length of database: 10,358,551
effective HSP length: 16
effective length of query: 558
effective length of database: 10,329,639
effective search space: 5763938562
effective search space used: 5763938562
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)